chore(repo): initialize reproducible research workspace
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source_id,citation,year,publication_status,evidence_type,domain_and_data,sample_or_scope,main_result,project_use,limitations,supports,does_not_support,doi_or_id,source_url,verification_status,checked_date
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L01,Chen et al. Pre-statistical harmonization of behavioral instruments across eight surveys and trials,2021,peer_reviewed,empirical workflow/methods,Behavioral instruments across eight dementia surveys and trials,Eight studies; manual instrument review plus automated raw-data checks,"Comparable-looking items often differed in wording, response options, scoring, or direction and required pre-statistical review",Defines the source-review and crosswalk work required before statistical linking,Different population and constructs; does not test semantic embeddings or cross-national DIF,"Official wording, response options, scoring, and populations must be reviewed before pooling",Semantic similarity alone establishes psychometric equivalence,10.1186/s12874-021-01431-6,https://doi.org/10.1186/s12874-021-01431-6,verified_primary,2026-09-20
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L02,Kołczyńska. Combining multiple survey sources: A reproducible workflow and toolbox for survey data harmonization,2022,peer_reviewed,methods/workflow,Four cross-national survey projects; trust items,"ESS, EVS, EQLS and Eurobarometer example","Crosswalk-centered, human-auditable documentation improves reproducibility of ex-post harmonization","Supports machine-readable source crosswalks, recodes, provenance and status tracking",Focuses recoding/documentation rather than latent linking or item semantics,Harmonization decisions and transformations need reusable documentation,A documented crosswalk proves measurement invariance,10.1177/20597991221077923,https://doi.org/10.1177/20597991221077923,verified_primary,2026-09-20
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L03,McElroy et al. Using natural language processing to facilitate the harmonisation of mental health questionnaires,2024,peer_reviewed,empirical validation,Five mental-health questionnaires in a UK adult sample,"2,058 participants; 741 item pairs",Sentence-BERT semantic similarity correlated moderately with empirical item correlations and predicted held-out pair correlations with small error,Closest evidence for semantic item matching and response-structure signal,"Adult UK sample, overlapping questionnaires and shared respondents; manual rules still needed; no cross-country DIF or survey-design inference",Text embeddings can help propose harmonization candidates,Embedding similarity verifies psychometric equivalence or transportability,10.1186/s12888-024-05954-2,https://doi.org/10.1186/s12888-024-05954-2,verified_primary,2026-09-20
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L04,Ravenda et al. Rethinking psychometrics through LLMs: how item semantics shape measurement and prediction in psychological questionnaires,2025,peer_reviewed,empirical proof-of-concept,"Big Five, DASS-42, GAD-7 and PHQ-9 questionnaire data",Large public questionnaire datasets; proof-of-concept response prediction,Semantic structure predicted empirical correlation patterns and supported prediction of responses to unseen items,Shows semantic representations can encode response-structure information in psychological questionnaires,Cross-cultural and multilingual transport were not established; predictive proof-of-concept is not survey harmonization,Item semantics may explain part of response covariance,"Universal psychometric equivalence, DIF recovery or calibrated cross-national latent scores",10.1038/s41598-025-21289-8,https://doi.org/10.1038/s41598-025-21289-8,verified_primary,2026-09-20
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L05,Yancey et al. BERT-IRT: Accelerating Item Piloting with BERT Embeddings and Explainable IRT Models,2024,peer_reviewed_conference,method plus operational evaluation,Duolingo English Test items,High-stakes language assessment item bank; exact proprietary sample details require full-paper extraction,BERT embeddings and engineered features reduced pilot length while maintaining reported criterion validity and reliability,Direct precedent for text features predicting IRT item parameters,"Educational test items differ from suicide-related survey items; does not address cross-country DIF, complex samples or latent phenotype harmonization",Text-derived item features can inform item-parameter estimation,This project's core method is unprecedented or immediately transferable to health surveys,ACL Anthology 2024.bea-1.35,https://aclanthology.org/2024.bea-1.35/,verified_primary,2026-09-20
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L06,Chen and Chen. From Text to Parameters: Predicting Item Parameters from Embedding Regularization with Reliability and Design Ceilings,2026,preprint,method/benchmark,Mathematics and medical-licensure item banks,Two item banks; repeated cross-validation and simulation-based ceilings,Difficulty was more predictable than other parameters; reliability/design ceilings and repeated splits changed interpretation,"Requires uncertainty-aware targets, repeated grouped validation and ceiling analysis for semantic parameter prediction",Preprint; educational/assessment domains; not cross-national mental-health surveys,Parameter-prediction benchmarks need target reliability and design ceilings,Reported RMSE alone establishes useful semantic signal,arXiv:2607.07141,https://arxiv.org/abs/2607.07141,verified_preprint,2026-09-20
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L07,Peters et al. Text-Based Approaches to Item Difficulty Modeling in Large-Scale Assessments: A Systematic Review,2025,preprint,systematic review,Automated item-difficulty prediction,37 articles through May 2025,"Language models can predict item difficulty in some settings, but studies vary in datasets, splits, targets and metrics",Maps existing text-to-difficulty literature and prevents novelty overclaiming,"Preprint; focuses large-scale assessment rather than health questionnaires, DIF or survey design",Text-based difficulty prediction is an established research area,Reported best-case metrics transfer to this project,arXiv:2509.23486,https://arxiv.org/abs/2509.23486,verified_preprint,2026-09-20
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L08,Muthén and Asparouhov. IRT studies of many groups: the alignment method,2014,peer_reviewed,method plus Monte Carlo,Binary knowledge items across many country groups,Two surveys plus simulation,Alignment estimates group factor means/variances without requiring exact invariance and reports parameter non-invariance,Core comparator for many-country measurement invariance and DIF,Requires a prespecified factor structure and adequate linkage; alignment is not proof that all groups share one construct,Approximate invariance can be studied across many groups,Alignment repairs absent empirical connections or identifies a scale from semantics alone,10.3389/fpsyg.2014.00978,https://doi.org/10.3389/fpsyg.2014.00978,verified_primary,2026-09-20
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L09,Mansolf et al. Extensions of Multiple-Group Item Response Theory Alignment,2020,peer_reviewed,"method, simulation and application",International psychiatric genomics consortium with disparate item sets and formats,Multiple sites/instruments plus real-data-based simulation,Extended alignment accommodated differing item sets and response categories and recovered parameters in simulation,Closest latent-harmonization comparator for psychiatric phenotypes with nonidentical instruments,Needs specified construct/factor model and empirical connections; population and sampling designs differ from this project,Disparate psychiatric item sets can sometimes be aligned with explicit assumptions,Semantic priors alone create a common scale or eliminate anchor requirements,10.1177/0013164419897307,https://doi.org/10.1177/0013164419897307,verified_primary,2026-09-20
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L10,Heinz et al. Item response theory and differential test functioning analysis of the HBSC-Symptom-Checklist across 46 countries,2022,peer_reviewed,cross-national psychometric application,Eight-item adolescent HBSC symptom checklist,"229,906 adolescents across 46 countries",Configural/metric invariance was more defensible than scalar invariance; alignment identified item non-invariance,Demonstrates the scale of cross-country adolescent DIF and consequences for comparisons,"Uses one established common instrument, not different survey tools or unseen-item semantic prediction",Cross-national adolescent comparisons require item-level invariance/DIF checks,A common questionnaire automatically yields scalar comparability,10.1186/s12874-022-01698-3,https://doi.org/10.1186/s12874-022-01698-3,verified_primary,2026-09-20
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L11,Savitsky and Williams. Pseudo Bayesian Mixed Models under Informative Sampling,2022,peer_reviewed,"method, simulation and application",Hierarchical models under informative multistage sampling,Simulation plus business-establishment survey example,Weighting only unit likelihood contributions can remain biased when random effects correlate with design; weighting random-effect distributions addresses this setting,Constrains how hierarchical country/survey effects and design weights can be combined,Not an IRT application; requires inclusion-probability information and design assumptions,Complex-sample Bayesian multilevel models need design-aware treatment beyond naive weighted likelihood,Multiplying every likelihood by a weight guarantees correct interval coverage,10.2478/jos-2022-0039,https://doi.org/10.2478/jos-2022-0039,verified_primary,2026-09-20
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L12,Wu and Stephenson. Bayesian estimation methods for survey data with potential applications to health disparities research,2024,peer_reviewed_review,narrative methodological review,Bayesian analysis of complex survey data,"Reviews MRP, weighted pseudo-likelihood and synthetic-population approaches",No single Bayesian survey method is universally sufficient; assumptions and target estimands determine the route,Provides the survey-design method map for later model specifications and sensitivity analyses,Review rather than project-specific validation; does not resolve IRT identification,Multiple defensible Bayesian survey strategies exist and must be chosen by estimand/design,Bayesian modeling automatically corrects informative sampling,10.1002/wics.1633,https://doi.org/10.1002/wics.1633,verified_primary,2026-09-20
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L13,Wu et al. Statistical harmonization of versions of measures across studies using external data,2025,peer_reviewed,calibration-sample method,Self-rated health and memory measured with different response formats,External calibration sample of 300 participants,A bridge sample answering both versions enabled model-based statistical harmonization with moderate agreement,Shows why bridge data may be necessary when archival surveys lack empirical links,Different constructs and older clinical population; external sample design differs from multi-item IRT,Targeted bridge data can identify transformations unavailable from disconnected archives,Text similarity can replace empirical bridge data without uncertainty,10.1016/j.annepidem.2025.01.002,https://doi.org/10.1016/j.annepidem.2025.01.002,verified_primary,2026-09-20
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# 阶段 0 文献定位与贡献边界
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日期:2026-09-20
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矩阵:`literature_matrix.csv`
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范围:聚焦检索,不是 PRISMA 系统综述
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## 检索问题
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本轮只覆盖支撑 Gate 0 的五个问题:
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1. 跨调查行为/心理问卷在统计建模前需要怎样的来源和题目审核?
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2. NLP/LLM 题目表示是否已经用于问卷匹配或响应结构预测?
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3. 文本特征是否已经用于预测 IRT 题目参数?
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4. 多组 IRT、alignment 和 DIF 如何处理多国家或不同题集?
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5. Bayesian 层级模型如何处理复杂和信息性抽样?
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检索优先使用期刊页面、PubMed/PMC、ACL Anthology 和论文预印本原页。无法独立确认存在或元数据的来源不进入矩阵。同行评审与预印本分开标记。
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## 证据综合
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### 1. 数据协调必须先做题目和来源审计
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Chen 等和 Kołczyńska 的工作支持先核对研究总体、题目正文、回答选项、计分方向、版本及转换记录。它们不支持仅凭相似变量名合并,也不支持把有文档的 crosswalk 当作测量等价证据。
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### 2. 语义问卷协调不是空白领域
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McElroy 等已用 Sentence-BERT 比较心理健康问卷题目,并在共同作答样本中检验语义相似与实证相关。Ravenda 等进一步展示题目语义与问卷响应结构及 unseen-item 响应预测的关系。因此,本项目不能宣称首次把语言模型用于心理问卷结构或协调。
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### 3. 文本预测 IRT 参数已有直接先例
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BERT-IRT 已把 BERT 嵌入和工程特征用于题目参数估计。Chen 与 Chen 的预印本及 Peters 等的预印本综述进一步表明 text-to-parameter / item-difficulty modeling 已形成独立研究线,并提示目标可靠性上限、重复交叉验证和 scale-free 指标的重要性。因此,“让嵌入预测题目难度”本身不是充分创新。
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### 4. 多组、跨国和不同题集协调已有成熟比较对象
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Muthén 与 Asparouhov 的 alignment、Mansolf 等对不同题集/回答格式的扩展,以及 Heinz 等对 46 国青少年量表的分析,构成项目必须比较或讨论的方法基础。共同问卷也可能不满足 scalar invariance;不同题集的 alignment 仍需要预设构念结构和经验连接。
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### 5. 复杂抽样不能用简单加权似然一句带过
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Savitsky 与 Williams 表明,在多层信息性抽样下,只给个体 likelihood 加权仍可能不足。Wu 与 Stephenson 的综述也显示 MRP、pseudo-likelihood 和 synthetic population 各自依赖不同估计目标和设计信息。本项目必须把设计型描述性估计、模型内权重处理和设计一致的区间/重抽样检查分开。
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## 当前可辩护的贡献候选
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现有矩阵没有发现一项已核验工作同时完成以下组合:
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- 以官方题目、回答标签、时间窗口和真实复杂抽样回答建立跨 GSHS、YRBS、NSDUH 的可追溯题库;
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- 在题目家族级留出下,让多语言语义表示条件化阈值、区分度和受约束 DIF;
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- 同时评估未见题目、未见问卷、未见国家/地区和时间外迁移;
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- 对未见题目/国家效应传播不确定性,而不是设为零;
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- 与直接协调、传统/层级 IRT、人工标签和非语义模型做公平消融;
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- 明确处理权重、PSU、stratum 及设计型不确定性。
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这只是阶段 0 的候选贡献边界,不是首创证明。正式论文前仍需扩大检索、做引用追踪和更新检索。
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## 对研究设计的约束
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1. 语义只提供候选先验或预测信息,不能替代经验锚定与可识别性。
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2. 训练/测试必须按题目家族和外层域分组;单次随机划分和 RMSE 不足以支持新题目校准。
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3. 对经验题目参数进行监督学习时,需传播参数估计误差或使用后验样本。
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4. 若跨调查图不连通,应提出桥接样本或限制主张,不用语义相似伪造共同标度。
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5. alignment 和其他传统协调方法是必要基线,不是可省略的背景文献。
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6. 复杂抽样区间需独立验证;Bayesian 标签本身不保证设计一致性。
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## 矩阵构成
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- 总条目:13
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- 同行评审:11
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- 预印本:2
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- 每条均记录:证据类型、数据/样本、主要结果、项目用途、限制、允许支持与不允许支持的主张、DOI/永久链接和核验状态。
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# Language-Conditioned Psychometric Harmonization Model:项目章程
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版本:0.1.0
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冻结日期:2026-09-20
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状态:`passed_for_gate_0`
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适用范围:阶段 0–2;阶段 2 完成后依据可识别性证据修订
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## 1. 项目目的与主要研究问题
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本项目不是普通个体风险预测竞赛,也不预设所有自杀相关变量属于一个单维量表。项目首先确认数据结构支持 IRT、层级测量、阶段/多结局模型还是只能直接协调。
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**Primary RQ:** 在 GSHS、YRBS 与 NSDUH 青少年相关数据中,题目正文、时间窗口和回答标签的语义表示,能否相对于最佳适用的无文本层级测量基线和人工构念标签基线,提高未见题目家族、未见问卷版本及未见国家/工具上的测量预测与校准,同时不造成有实质意义的区间质量退化?
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支撑问题:
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1. 现有调查的题目共现、锚定连接和题目家族多样性是否足以识别各构念?
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2. 措辞、时间窗口、回答格式、语言、国家、年份和工具是否产生有实质意义的 DIF 或测量非等价?
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3. 题目语义能否解释训练资料中的响应结构和题目参数,并跨题目家族泛化?
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4. 对未见国家、工具和题目,模型的不确定性是否校准;zero-shot 与 few-shot 的表现如何?
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5. 复杂抽样、缺失/跳题、锚题和总体定义的合理替代方案是否改变结论?
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## 2. 可证伪假设
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语言条件化测量模型在预先冻结的外层迁移任务中,相对于最佳适用的 M0/M1/M2 与人工标签基线,在指定共同主指标上达到预设最小有意义改善,且校准或覆盖不劣于预设界限。
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改善阈值、非劣界限和主指标数值将在阶段 2 的信息量审计和阶段 3 的模拟/功效校准后冻结。若语义模型没有稳定增益,项目输出应是阴性 benchmark 或适用边界,不更换测试集或事后挑选指标。
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## 3. 目标总体和时间地域范围
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- 对象:青少年调查参与者。
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- GSHS:跨国开发候选,主要是学校在读样本;常见核心年龄为 13–17 岁,但必须逐国家—年份组件核验。
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- YRBS:问卷和时间迁移候选;美国高中生样本不得外推到全部美国青少年。
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- NSDUH:外部候选;家庭抽样框与学校调查框不可静默视为同一总体。
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- 跨工具比较优先使用年龄与适用总体共同支持域。精确年龄带在阶段 1 建立总体适用表后冻结;不能统一的总体分层报告。
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- YRBS 原始年份候选为 1991–2023;当前处理入口只到 2019,2021/2023 在布局验证前隔离。
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- NSDUH 当前处理候选为 2021–2024,只纳入确认属于青少年模块且有官方问题/编码证据的变量。
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- 国家背景仅在测量层建立后加入,并按调查时点可得性匹配。
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## 4. 构念与变量角色
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测量层分开登记,不预设单维:
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1. suicidal ideation
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2. suicide plan
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3. suicide attempt(二元和次数形式分开)
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4. self-harm(是否共模需证据)
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5. sadness/hopelessness(是否共模需证据)
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欺凌、孤独、睡眠、物质使用、家庭/同伴支持、暴力暴露及国家背景属于解释或分层变量,不因相关或预测作用自动变成自杀风险量表题目。横断面关联不表述为因果或个体纵向预测。
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阶段 2 为每个构念选择:IRT/多维测量、阶段/潜类别/多结局、直接二分类/频数协调,或分调查报告。
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## 5. 数据角色与唯一候选入口
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| 数据源 | 候选角色 | 唯一候选入口 | 状态 |
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|---|---|---|---|
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| GSHS | 跨国开发及未见国家验证 | `Dataset/GSHS-全球学生健康调查数据/GSHS/01_data/GSHS.csv` | `audit_required` |
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| YRBS | 问卷版本及时间迁移 | 处理包 `YRBS/full_by_year`(1991–2019);原始核验用 `YRBS_National_1991_2023/raw` | `conditional` |
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| NSDUH | 外部工具/总体候选 | `可直接分析数据包_NSDUH_YRBS/NSDUH/nsduh_2021_2024_full.parquet` | `conditional` |
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| World Bank/WHO context | 后期国家—年份解释层 | `WHO-country_context/world_bank_country_year_1990_2025.csv` 及来源长表 | `conditional` |
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| 其他目录 | 外部候选、文档或 provenance archive | 无 | 不进入核心分析,除非书面改版 |
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入口是审计入口,不表示其中变量已经通过题义、总体、设计或许可审计。
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## 6. 冻结的迁移任务
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1. **Unseen item family**:同一家族全部措辞、翻译、回答和监督信号留出。
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2. **Unseen questionnaire version**:整个版本及泄漏等价版本留出。
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3. **Unseen country**:该国全部年份和组件回答留出,未知国家效应从层级分布预测并传播不确定性。
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4. **Unseen region**:整个预定地区留出。
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5. **Temporal extrapolation**:早期训练、后期测试,背景按预测时点可得性处理。
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6. **Cross-instrument**:总体和结局定义审计通过后再跨工具评估。
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随机个体划分只用于调试或辅助比较,不作为核心迁移主张证据。
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## 7. 估计目标和指标层级
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主要目标是题目阈值/难度、区分度、DIF、共同标度成立时的潜在表型/群体分布,以及新题目/新域的预测分布与不确定性。
|
||||
|
||||
共同主指标候选:未见题目家族 held-out log score;未见国家/工具共同目标上的校准或分布误差;模拟已知真值下参数恢复与覆盖;群体估计的设计加权误差与区间表现。AUPRC、AUROC、Brier 等为辅助预测指标,不能单独证明测量协调成功。
|
||||
|
||||
## 8. 识别和调查设计原则
|
||||
|
||||
- 语义相似只产生候选连接,不证明锚题不变或共同标度成立。
|
||||
- 国家均值、阈值平移和无约束 DIF 可能混淆;正式模型必须声明标度、参考组、锚题和 DIF 约束。
|
||||
- 独立信息单位主要是题目家族/版本及国家/工具等外层单元;大量受访者不能补偿题目种类不足。
|
||||
- 保留权重、PSU、stratum、国家—年份及组件标识。
|
||||
- 权重进入似然不等同于设计一致区间;描述性设计方差、模型内权重和设计型重抽样分开验证。
|
||||
- 未施测、不适用、合法跳题、拒答、不知道、普通缺失和真实阴性分开。
|
||||
|
||||
## 9. 范围外事项
|
||||
|
||||
- 临床诊断、个体自杀预测或资源分配工具。
|
||||
- 用国家自杀死亡率作个体结局。
|
||||
- 无总体限定地把学校样本外推到全部青少年。
|
||||
- 在跨构念/数据集/任务证据不足时称为 foundation model。
|
||||
- 在阶段 2/3 前冻结最终深度架构、最终嵌入模型或结果后阈值。
|
||||
- 把 AI 预审登记为两名人类审核者。
|
||||
- 分发未经确认允许的微观数据。
|
||||
|
||||
## 10. 伦理、许可和治理
|
||||
|
||||
- 数据按去标识化二次数据处理,但使用仍受来源现行条款和机构要求约束。
|
||||
- 不重新识别参与者,不公开再分发许可未确认的微数据。
|
||||
- 主要结局进入确认性分析前需两名实际审核者复核;AI 检查只标 provisional。
|
||||
- 输出记录 AI 辅助、数据来源、版本、哈希、模型/包版本及 unknown 状态。
|
||||
- 原始数据只读;衍生产物写入 `research/`。
|
||||
- 改变总体、构念、数据角色、测试任务或成功判据时,必须提高本章程版本并在 `Progression.md` 记录原因。
|
||||
|
||||
## 11. 阶段 0 待验证清单
|
||||
|
||||
1. 各调查组件的年龄、在校状态、地域、语言和问卷版本。
|
||||
2. 主要结局官方正文、答案标签、时间窗口、跳题和派生规则。
|
||||
3. GSHS 权重、PSU、stratum 的调查级有效性。
|
||||
4. YRBS 2021/2023 官方布局、导入程序、记录数和本地文件一致性。
|
||||
5. NSDUH 青少年/成人/COVID/派生变量边界及正确权重/方差设计。
|
||||
6. 锚题图、题目共现、阳性事件、结构缺失及有效题目家族数。
|
||||
7. 各来源现行许可、引用要求及衍生数据分发范围。
|
||||
8. 最接近方法文献和真实贡献边界;不得预设首创。
|
||||
9. 缺失的 R、复杂抽样、PyMC/ArviZ 和心理测量环境的锁定方案。
|
||||
|
||||
## 12. Gate 与停止条件
|
||||
|
||||
Gate 0 要求本章程、数据清单、文献矩阵和环境审计齐备。Gate 1 要求正式题目均有来源、编码、总体与缺失规则且主要结局完成人工双重核查。Gate 2 要求每个构念得到可进入潜变量模型/有条件/仅直接协调/不纳入的证据判定。
|
||||
|
||||
官方文本或编码无法确认、图不连通/标度不可识别、题目家族不足、设计字段不完整或参数恢复失败时按工作流降级;不得通过增加模型复杂度、替换最终测试或扩大主张掩盖失败。
|
||||
|
||||
## 13. 输入绑定
|
||||
|
||||
| 输入 | SHA-256 |
|
||||
|---|---|
|
||||
| `Document/research-workflow.md` | `394a191359298132fc2a56304dbc49b5934f47af22d2e0fff47d28a0d9edcaeb` |
|
||||
| `Document/项目的正式定位.md` | `28a415ff5d42649df2a7c68079ae0abfd295cbffb5fead216934a895cca4cd13` |
|
||||
| `Document/language-conditioned-psychometric-harmonization-model.md` | `39d2050735f4df28c6abe08f8d1de6094b7ac11d0b6f2ccf9fd66d4cc450a825` |
|
||||
| `research/audit/data_manifest.csv` | `0427a19c3287a2691edbd9a4486917989fe369fcb0f729a01477ce27cd8f98f2` |
|
||||
| `research/audit/data_source_registry.csv` | `ac68b9928f8855c5373034a30adda316da1da2f1a1e890b0c23f836f12d55b67` |
|
||||
| `research/audit/environment_audit.md` | `c84a6b05718bbaf7762021aa45b2f983e7c9ef844d41592d2138439251e929eb` |
|
||||
|
||||
Reference in New Issue
Block a user